PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_009628610.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family NAC
Protein Properties Length: 126aa    MW: 14532.2 Da    PI: 6.5267
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_009628610.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM33.71e-10101183109
             NAM   3 pGfrFhPtdeelvveyLkkkvegkkleleev.ikevdiy.kvePwdLp.k...kvkaeekew..yfFskrdkkyatgkrknratksgyWkatgkd 89 
                      GfrF+Ptd+e +  +L + v g++++ + +  ++vd+y k ePw++  +   + + e++    yf +k ++k++   ++  + k     + g+ 
  XP_009628610.1  10 EGFRFRPTDSEGL-MFLLRFVVGQEMHDSGFtTTNVDVYgKQEPWEIYdNgvpCGDDEDSTSyrYFITKLKRKNKGTWKQDNKGKPVHYINMGNA 103
                     6**********99.6777777777766656659999*99456*****744555222233333236666655554333333334445556666666 PP

             NAM  90 kevlskkgelvglkktLvfy 109
                      +v++     +g k+ L + 
  XP_009628610.1 104 SSVVN-----IGSKTNLSYK 118
                     66665.....5666666554 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5100510.098126IPR003441NAC domain
PfamPF023653.9E-810118IPR003441NAC domain
SuperFamilySSF1019418.89E-1010117IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 126 aa     Download sequence    Send to blast
MEQIQQLGQE GFRFRPTDSE GLMFLLRFVV GQEMHDSGFT TTNVDVYGKQ EPWEIYDNGV  60
PCGDDEDSTS YRYFITKLKR KNKGTWKQDN KGKPVHYINM GNASSVVNIG SKTNLSYKNK  120
VFYPED
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009628610.12e-91PREDICTED: uncharacterized protein LOC104118924
TrEMBLM1D2T51e-37M1D2T5_SOLTU; Uncharacterized protein
STRINGPGSC0003DMT4000799904e-37(Solanum tuberosum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA22191254